IAS Gyan

Daily News Analysis

dbGENVOC

8th July, 2021 Science and Technology

Context

  • DBT-National Institute of Biomedical Genomics (NIBMG), Kalyani has created a database of genomic variations in oral cancer; the first of its kind in the world.
  • NIBMG has made this database publicly-accessible.

 

About

  • dbGENVOC is a browsable online database of GENomic Variants of Oral Cancer and is a free resource.
  • First release of dbGENVOC contains
  • ~24 million somatic and germline variants derived from whole exome sequences of 100 Indian oral cancer patients and whole genome sequences of 5 oral cancer patients from India,
  • somatic variation data from 220 patient samples drawn from the USA and analyzed by TCGA-HNSCC project and
  • Manually curated variation data of 118 patients from recently published peer-reviewed publications.
  • Oral cancer is the most prevalent form of cancer among men in India, largely fuelled by tobacco-chewing.
  • Tobacco-chewing causes changes in the genetic material of cells in the oral cavity. These changes (mutations) precipitate oral cancer.